Bárcenas-Pérez, D, Lukeš, M, Hrouzek, P, Zápal, J, Kuzma, M, Kopecký, J, Kubáč, D, Arredondo-Vega, BO, Cheel, J*: Bio-production of eicosapentaenoic acid from the diatiom Nanofrustulum shiloi via two-step high performance countercurrent chromatography. Journal of Applied Phycology 34, 2995-3010, 2022. https://doi.org/10.1007/s10811-022-02816-w

Bárcenas-Pérez, D, Lukeš, M, Hrouzek, P, Kubáč, D, Kopecký, J, Kaštánek, P, Cheel, J*: A biorefinery approach to obtain docosahexaenoic acid and docosapentaenoic acid n-6 from Schizochytrium using high performance countercurrent chromatography. Algal Research 55, 102241, 2021. https://doi.org/10.1016/j.algal.2021.102241

Činčárová, D, Hájek, J, Dobřichovský, M, Lukeš, M, Hrouzek, P*: Recommendations on the quantitative analysis of pheophorbides photosensitizers present in algal biomass intended as food supplement. Algal Research 56, 102298, 2021. https://doi.org/10.1016/j.algal.2021.102298

Felcmanová, K, Lukeš, M, Kotabová, E, Lawrenz, E, Halsey, KH, Prášil, O*: Carbon use efficiencies and allocation strategies in Prochlorococcus marinus strain PCC 9511 during nitrogen-limited growth. Photosynthesis Research 134(1), 71-82, 2017. https://doi.org/10.1007/s11120-017-0418-3

Janouškovec, J*, Sobotka, R, Lai, D-H, Flegontov, P, Koník, P, Komenda, J, Ali, S, Prášil, O, Pain, A, Oborník, M, Lukeš, J, Keeling, PJ: Split photosystem protein, linear-mapping topology, and growth of structural complexity in the plastid genome of Chromera velia. Molecular Biology and Evolution 30, 2447–62, 2013. https://doi.org/10.1093/molbev/mst144

Janouskovec, J*, Keeling, PJ*: Evolution: Causality and the origin of parasitism. Current Biology 26, R174–R177, 2016. https://doi.org/10.1016/j.cub.2015.12.057

Janouškovec, J*, Gavelis, GS, Burki, F, Dinh, D, Bachvaroff, TR, Gornik, SG, Bright, KJ, Imanian, B, Strom, SL, Delwiche, CF, Waller, RF, Fensome, RA, Leander, BS, Rohwer, FL, Saldarriaga, JF: Major transitions in dinoflagellate evolution unveiled by phylotranscriptomics. Proceedings of the National Academy of Sciences 114, E171–E180, 2017. https://doi.org/10.1073/pnas.1614842114

Janouškovec, J*, Horák, A, Barott, KL, Rohwer, FL, Keeling, PJ: Environmental distribution of coral-associated relatives of apicomplexan parasites. The ISME Journal 7, 444–7, 2013. https://doi.org/10.1038/ismej.2012.129

Janouškovec, J*, Liu, S-L, Martone, PT, Carré, W, Leblanc, C, Collén, J, Keeling, PJ: Evolution of red algal plastid genomes: Ancient architectures, introns, horizontal gene transfer, and taxonomic utility of plastid markers. PLOS ONE 8, e59001, 2013. https://doi.org/10.1371/journal.pone.0059001

Janouškovec, J*, Paskerova, GG, Miroliubova, TS, Mikhailov, KV, Birley, T, Aleoshin, VV, Simdyanov, TG: Apicomplexan-like parasites are polyphyletic and widely but selectively dependent on cryptic plastid organelles. eLife 8, e49662, 2019. https://doi.org/10.7554/eLife.49662

Janouškovec, J*, Tikhonenkov, DV, Burki, F, Howe, AT, Kolísko, M, Mylnikov, AP, Keeling, PJ: Factors mediating plastid dependency and the origins of parasitism in apicomplexans and their close relatives. PNAS 112, 10200–07, 2015. https://doi.org/10.1073/pnas.1423790112

Janouškovec, J*, Tikhonenkov, DV, Burki, F, Howe, AT, Rohwer, FL, Mylnikov, AP, Keeling, PJ: A new lineage of eukaryotes illuminates early mitochondrial genome reduction. Current Biology 27, 3717-3724.e5, 2017. https://doi.org/10.1016/j.cub.2017.10.051

Janouškovec, J*, Tikhonenkov, DV, Mikhailov, KV, Simdyanov, TG, Aleoshin, VV, Mylnikov, AP, Keeling, PJ*: Colponemids represent multiple ancient alveolate lineages. Current Biology 23, 2546–52, 2013. https://doi.org/10.1016/j.cub.2013.10.062

Janouškovec, J, Horák, A, Barott, KL, Rohwer, FL, Keeling, PJ*: Global analysis of plastid diversity reveals apicomplexan-related lineages in coral reefs. Current Biology 22, R518-9, 2012. https://doi.org/10.1016/j.cub.2012.04.047

Janouškovec, J, Horák, A, Oborník, M, Lukeš, J, Keeling PJ*: A common red algal origin of the apicomplexan, dinoflagellate, and heterokont plastids. Proceedings of the National Academy of Sciences of the United States of America 107, 10949–54, 2010. https://doi.org/10.1073/pnas.1003335107

Knoppová, J, Yu, J, Janouškovec, J, Halada, P, Nixon, PJ, Whitelegge, JP, Komenda, J*: The Photosystem II Assembly Factor Ycf48 from the Cyanobacterium Synechocystis sp. PCC 6803 Is Lipidated Using an Atypical Lipobox Sequence. International Journal of Molecular Sciences 22(7), 3733, 2021. https://doi.org/10.3390/ijms22073733

Koblížek, M*, Janouškovec, J, Oborník, M, Johnson, JH, Ferriera, S, Falkowski, PG: Genome sequence of the marine photoheterotrophic bacterium Erythrobacter sp. strain NAP1. Journal of Bacteriology 193, 5881–2, 2011. https://doi.org/10.1128/JB.05845-11

Lukeš, M*, Giordano, M, Prášil, O: The effect of environmental factors on fatty acid composition of Chromera velia (Chromeridae). Journal of Applied Phycology 29(4), 1791-1799, 2017. https://doi.org/10.1007/s10811-017-1114-6

Lukeš, M*, Giordano, M, Prášil, O: The effect of light quality and quantity on carbon allocation in Chromera velia. Folia Microbiologica 64(5), 655-662, 2019. https://doi.org/10.1007/s12223-019-00734-y

Masojídek, J*, Ranglová, K, Rearte, TA, Celis Plá, PSM, Torzillo, G, Benavides, AMS, Neori, A, Gómez, C, Álvarez-Gómez, F, Lukeš, M, Caporgno, MP, Abdala, R, Miazek, K, Massocato, TF, da Silva, JC, Atzmüller, R, Al Mahrouqui, H, Estrella, FS, Figueroa, FL: Changes in photosynthesis, growth and biomass composition in outdoor Chlorella g120 culture during the metabolic shift from heterotrophic to phototrophic cultivation regime. Algal Research 56, 102303, 2021. https://doi.org/10.1016/j.algal.2021.102303