Centrum Algatech

Mikrobiologický ústav AV ČR, v.v.i. - vědecké pracoviště Třeboň

Laboratoř fotosyntézy 

Publikace

CitaceRok

Paskerova, GG*, Miroliubova, TS, Valigurová, A, Janouškovec, J, Kováčiková, M, Diakin, A, Sokolova, YY, Mikhailov, KV, Aleoshin, VV, Simdyanov, TG: Evidence from the resurrected family Polyrhabdinidae Kamm, 1922 (Apicomplexa: Gregarinomorpha) supports the epimerite, an attachment organelle, as a major eugregarine innovation. PeerJ 9, e11912, 2021. https://doi.org/10.7717/peerj.11912


2021

Borodina, AS, Mylnikov, AP, Janouškovec, J, Keeling, PJ, Tikhonenkov, DV*: The Morphology, Ultrastructure and Molecular Phylogeny of a New Freshwater Heterolobose Amoeba Parafumarolamoeba stagnalis n. Sp. (Vahlkampfiidae; Heterolobosea). Diversity 13(9), 433, 2021. https://doi.org/10.3390/d13090433


2021

Knoppová, J, Yu, J, Janouškovec, J, Halada, P, Nixon, PJ, Whitelegge, JP, Komenda, J*: The Photosystem II Assembly Factor Ycf48 from the Cyanobacterium Synechocystis sp. PCC 6803 Is Lipidated Using an Atypical Lipobox Sequence. International Journal of Molecular Sciences 22(7), 3733, 2021. https://doi.org/10.3390/ijms22073733


2021

Tikhonenkov, DV*, Strassert, JFH*, Janouškovec, J, Mylnikov, AP, Aleoshin, VV, Burki, F, Keeling, PJ: Predatory colponemids are the sister group to all other alveolates. Molecular Phylogenetics and Evolution 149, 106839, 2020. https://doi.org/10.1016/j.ympev.2020.106839


2020

Miroliubova, TS*, Simdyanov, TG, Mikhailov, KV, Aleoshin, VV, Janouškovec, J, Belova, PA, Paskerova GG: Polyphyletic origin, intracellular invasion, and meiotic genes in the putatively asexual agamococcidians (Apicomplexa incertae sedis ). Scientific Reports 10, 15847, 2020. https://doi.org/10.1038/s41598-020-72287-x


2020

John, U*, Lu, Y, Wohlrab, S, Groth, M, Janouškovec, J, Kohli, GS, Mark, FC, Bickmeyer, U, Farhat, S, Felder, M, Frickenhaus, S, Guillou, L, Keeling, PJ, Moustafa, A, Porcel, BM, Valentin, K, Glöckner, G*: An aerobic eukaryotic parasite with functional mitochondria that likely lacks a mitochondrial genome. Science Advances 5, eaav1110, 2019. https://doi.org/10.1126/sciadv.aav1110


2019

Janouškovec, J*, Paskerova, GG, Miroliubova, TS, Mikhailov, KV, Birley, T, Aleoshin, VV, Simdyanov, TG: Apicomplexan-like parasites are polyphyletic and widely but selectively dependent on cryptic plastid organelles. eLife 8, e49662, 2019. https://doi.org/10.7554/eLife.49662


2019

Záhonová, K, Petrželková, R, Valach, M, Yazaki, E, Tikhonenkov, DV, Butenko, A, Janouškovec, J, Hrdá, Š, Klimeš, V, Burger, G, Inagaki, Y, Keeling, PJ, Hampl, V, Flegontov, P, Yurchenko V, Eliáš M*: Extensive molecular tinkering in the evolution of the membrane attachment mode of the Rheb GTPase. Scientific Reports 8, 5239, 2018. https://doi.org/10.1038/s41598-018-23575-0


2018

Strassert, JFH*, Karnkowska, A, Hehenberger, E, del Campo, J, Kolisko, M, Okamoto, N, Burki, F, Janouškovec, J, Poirier, C, Leonard, G, Hallam, SJ, Richards, TA, Worden, AZ, Santoro, AE, Keeling, PJ: Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates. The ISME Journal 12, 304–308, 2018. https://doi.org/10.1038/ismej.2017.167


2018

Bass, D*, Tikhonenkov, DV, Foster, R, Dyal, P, Janouškovec, J, Keeling, PJ, Gardner, M, Neuhauser, S, Hartikainen, H, Mylnikov, AP, Berney, C: Rhizarian ‘Novel Clade 10’ revealed as abundant and diverse planktonic and terrestrial flagellates, including Aquavolon n. gen. Journal of Eukaryotic Microbiology 65, 828–842, 2018. https://doi.org/10.1111/jeu.12524


2018

Janouškovec, J*, Gavelis, GS, Burki, F, Dinh, D, Bachvaroff, TR, Gornik, SG, Bright, KJ, Imanian, B, Strom, SL, Delwiche, CF, Waller, RF, Fensome, RA, Leander, BS, Rohwer, FL, Saldarriaga, JF: Major transitions in dinoflagellate evolution unveiled by phylotranscriptomics. Proceedings of the National Academy of Sciences 114, E171–E180, 2017. https://doi.org/10.1073/pnas.1614842114


2017

del Cortona, A, Leliaert, F, Bogaert, KA, Turmel, M, Boedeker, C, Janouškovec, J, Lopez-Bautista, JM, Verbruggen, H, Vandepoele, K, De Clerck, O*: The plastid genome in Cladophorales green algae is encoded by hairpin chromosomes. Current Biology 27, 3771-3782.e6, 2017. https://doi.org/10.1016/j.cub.2017.11.004


2017

Janouškovec, J*, Tikhonenkov, DV, Burki, F, Howe, AT, Rohwer, FL, Mylnikov, AP, Keeling, PJ: A new lineage of eukaryotes illuminates early mitochondrial genome reduction. Current Biology 27, 3717-3724.e5, 2017. https://doi.org/10.1016/j.cub.2017.10.051


2017

Janouskovec, J*, Keeling, PJ*: Evolution: Causality and the origin of parasitism. Current Biology 26, R174–R177, 2016. https://doi.org/10.1016/j.cub.2015.12.057


2016

Tikhonenkov, DV, Janouškovec, J, Keeling, PJ, Mylnikov, AP*: The morphology, ultrastructure and SSU rRNA gene sequence of a new freshwater flagellate, Neobodo borokensis n. sp. (Kinetoplastea, Excavata). Journal of Eukaryotic Microbiology 63, 220–32, 2016. https://doi.org/10.1111/jeu.12271


2016

Kirby, WA, Tikhonenkov, DV, Mylnikov, AP, Janouškovec, J, Lax, G, Simpson, AGB*: Characterization of Tulamoeba bucina n. sp., an extremely halotolerant amoeboflagellate heterolobosean belonging to the Tulamoeba-Pleurostomum clade (Tulamoebidae n. fam.). Journal of Eukaryotic Microbiology 62, 227–238, 2015. https://doi.org/10.1111/jeu.12172


2015

Janouškovec, J*, Tikhonenkov, DV, Burki, F, Howe, AT, Kolísko, M, Mylnikov, AP, Keeling, PJ: Factors mediating plastid dependency and the origins of parasitism in apicomplexans and their close relatives. PNAS 112, 10200–07, 2015. https://doi.org/10.1073/pnas.1423790112


2015

Flegontov, P, Michálek, J, Janouškovec, J, Lai, DH, Jirků, M, Hajdušková, E, Tomčala, A, Otto, TD, Keeling, PJ, Pain, A, Oborník, M*, Lukeš, J*: Divergent Mitochondrial Respiratory Chains in Phototrophic Relatives of Apicomplexan Parasites. Molecular Biology and Evolution 32(5), 1115-1131, 2015. https://doi.org/10.1093/molbev/msv021

 


2015

Woo, YH*, Ansari, H, Otto, TD, Klinger, CM, Kolisko, M, Michálek, J, Saxena, A, Shanmugam, D, Tayyrov, A, Veluchamy, A, Ali, S, Bernal, A, del Campo, J, Cihlář, J, Flegontov, P,  Gornik, SG, Hajdušková, E, Horák, A, Janouškovec, J, Katris, NJ, Mast, FD,  Miranda-Saavedra, D, Mourier, T, Naeem, R, Nair, M, Panigrahi, AK, Rawlings, ND, Padron-Regalado, E, Ramaprasad, A, Samad, A, Tomčala, A, Wilkes, J, Neafsey, DE, Doerig, Ch, Bowler, Ch, Keeling, PJ, Roos, DS, Dacks, JB, Templeton, TJ, Waller, RF, Lukeš, J, Oborník, M, Pain, A: Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites. eLife 4, 2015. https://doi.org/10.7554/eLife.06974


2015

Tikhonenkov, DV*, Janouškovec, J, Mylnikov, AP, Mikhailov, KV, Simdyanov, TG, Aleoshin, VV, Keeling, PJ: Description of Colponema vietnamica sp.n. and Acavomonas peruviana n. gen. n. sp., two new alveolate phyla (Colponemidia nom. nov. and Acavomonidia nom. nov.) and their contributions to reconstructing the ancestral state of alveolates and eukaryotes. PLOS ONE 9, e95467, 2014. https://doi.org/10.1371/journal.pone.0095467


2014