Chrupková, P, Hovan, A, Koblížek, M, Gardiner, AT, Polívka, T, Kloz, M*: Vibrational signature of 1¹B_u⁺ and hot 2¹A_g^- excited states of carotenoids revisited by femtosecond stimulated Raman spectroscopy. Physical Chemistry Chemical Physics 27(37), 20313-20325, 2025. https://doi.org/10.1039/D5CP02711J

Villena-Alemany, C*, Tomaš, AV, Mujakić, I, Kopejtka, K, Šantić, D, Koblížek, M: Lineage-specific phototrophy and lifestyle of coastal marine aerobic anoxygenic phototrophs. Ocean Microbiology 1, 5, 2025. https://doi.org/10.1186/s44375-025-00005-x

Camara Manoel, JA, Štěrbová, K, Saini, MK, Bárcenas-Pérez, D, Cheel, J, Grivalský, T, Lakatos, GE, Lukeš, M, Urajová, P, Ferreira, A, Figueiredo, D, Gouveia, L, Masojídek, J, Saurav, K*: Microalgae-associated Stenotrophomonas maltophilia enhances lutein production and biostimulant activity in Monoraphidium sp. Algal Research 91, 104250, 2025. https://doi.org/10.1016/j.algal.2025.104250

Villamor, J, Ramos-Barbero, MD, Moreno-Paz, M, Villena Alemany, C, Martínez-García, M, Parro, V, Antón, J, Santos, F*: Novel viruses of Haloquadratum walsbyi expand the known archaeal virosphere of hypersaline environments. The ISME Journal 19(1), wraf149, 2025. https://doi.org/10.1093/ismejo/wraf149

Tomasch, J*, Bartling, P, Vollmers, J, Wöhlbrand, L, Jarek, M, Rohde, M, Brinkmann, H, Freese, HM, Rabus, R, Petersen, J*: Structural and regulatory determinants of flagellar motility in Rhodobacterales—the archetypal flagellum of Phaeobacter inhibens DSM 17395. mSystems 10(8), e0041925, 2025. https://doi.org/10.1128/msystems.00419-25

Vatareck, E, Rick, T, Gomez, NO, Bandyopadhyay, A, Kramer, J, Strunin, D, Erdmann, J, Hartmann, O, Alpers, K, Boedeker, C, Steffen, A, Sieben, C, Zhao, G, Tomasch, J, Häussler, S*: Epigenetic cellular memory in Pseudomonas aeruginosa generates phenotypic variation in presponse to host environments. PNAS 122(27), e2415345122, 2025. https://doi.org/10.1073/pnas.2415345122

Das, I, Chazan, A, Church, JR, Larom, S, León, R, Gómez-Villegas, P, Bárcenas-Pérez, D, Cheel, J, Koblížek, M, Béja, O*, Schapiro, I*, Sheves, M*: Selective Choice of the Efficient Carotenoid Antenna by a Xanthorhodopsin: Controlling Factors for Binding and Excitation Energy Transfer. JACS Au 5(7), 3070-3081, 2025. https://doi.org/10.1021/jacsau.4c01243

Tzlil, G, Marín, MD, Matsuzaki, Y, Nag, P, Itakura, S, Mizuno, Y, Murakoshi, S, Tanaka, T, Larom S, Konno, M, Abe-Yoshizumi, R, Molina-Márquez, A, Bárcenas-Pérez, D, Cheel, J, Koblížek, M, León, R, Katayama, K, Kandori, H, Schapiro, I, Shihoya, W*, Nureki, O*, Inoue, K*, Rozenberg, A*, Chazen, A*, Béja, O*: Structural insights into light harvesting by antenna-containing rhodopsins in marine Asgard archaea. Nature Microbiology 10, 1484-1500, 2025. https://doi.org/10.1038/s41564-025-02016-5

Wang, W, Liu, Y, Gu, J, An, S, Ma, C, Gao, H, Jiao, N, Shen, J-R, Beatty, JT, Koblížek, M, Zhan, X*, Zheng, Q*, Chen, J-H*: Cryo-EM Analysis of a Tri-Heme Cytochrome-Associated RC-LH1 Complex from the Marine Photoheterotrophic Bacterium Dinoroseobacter Shibae. Advanced Science 12(18), 2413456, 2025. https://doi.org/10.1002/advs.202413456

Šantić, D*, Stojan, I, Vrdoljak Tomaš, A, Milić Roje, B, Mujakić, I, Villena-Alemany, C, Koblížek, M, Jozić, S, Šolić, M, Šestanović, S: Contribution of different bacterial groups in the carbon flow through the microbial food web. Estuarine, Coastal and Shelf Science 318, 109228, 2025. https://doi.org/10.1016/j.ecss.2025.109228

Delawská, K, Hájek, J, Voráčová, K, Kuzma, M, Mareš, J, Vicková, K, Kádek, A, Tučková, D, Gallob, F, Divoká, P, Moos, M, Opekar, S, Koch, L, Saurav, K, Sedlák, D, Novák, P, Urajová, P, Dean, J, Gažák, R, Niedermeyer, TJH, Kameník, Z, Šimek, P, Villunger, A, Hrouzek, P*: Discovery of nostatin A, an azole-containing proteusin with prominent cytostatic and pro-apoptotic activity. Organic & Biomolecular Chemistry 23(2), 449-460, 2025. https://doi.org/10.1039/d4ob01395f

Uragami, C, Yoshida, M, Gardiner, AT, Cogdell, RJ, Hashimoto, H*: Excitation Energy Transfer Dynamics from Carotenoid to Bacteriochlorophyll a in the LH2 Complex of Rhodobacter sphaeroides: Insights from Reconstitution Experiments with Carotenoids and B800 Bacteriochlorophyll a. Molecules 30(4), 814, 2025. https://doi.org/10.3390/molecules30040814

Javed, A, Lüttig, J, Charvátová, K, Sanders, SE, Willow, R, Zhang, M, Gardiner, AT, Malý, P*, Ogilvie, JP*: Photosynthetic Energy Transfer: Missing in Action (Detected Spectroscopy)? Journal of Chemistry Letters 15(50), 12376-12386, 2024. https://doi.org/10.1021/acs.jpclett.4c02665

Leinberger, J*, Koteska, D, Boldt, J, Petersen, J, Shivaramu, S, Tomasch, J, Schulz, S, Brinkhoff, T*: Chemical quantification of N-acyl alanine methyl ester (NAME) production and impact on temporal gene expression patterns in Roseovarius tolerans EL-164. BMC Microbiology 24, 489, 2024. https://doi.org/10.1186/s12866-024-03624-7

Gazulla, CR*, Koblížek, M, Mercado, JM, Gasol, JM, Sánchez, O, Ferrera, I*: Aerobic anoxygenic phototrophic bacteria correlate with picophytoplankton across the Atlantic Ocean but show unique vertical bioenergetics. Limnology and Oceanography 69(11), 2503-2515, 2024. https://doi.org/10.1002/lno.12682

Kopejtka, K, Tomasch, J, Shivaramu, S, Saini, MK, Kaftan, D, Koblížek, M*: Minimal transcriptional regulation of horizontally transferred photosynthesis genes in phototrophic bacterium Gemmatimonas phototrophica. mSystems 9(9), e0070624, 2024. https://doi.org/10.1128/msystems.00706-24

Vanharanta, M*, Santoro, M, Villena-Alemany, C, Piiparinen, J, Piwosz, K, Grossart, HP, Labrenz, M, Spilling, K: Microbial remineralization processes during postspring-bloom with excess phosphate available in the northern Baltic Sea. FEMS Microbiology Ecology 100(8), fiae103, 2024. https://doi.org/10.1093/femsec/fiae103

Šímová, I, Chrupková, P, Gardiner, AT, Koblížek, M, Kloz, M, Polívka, T*: Femtosecond Stimulated Raman Spectroscopy of Linear Carotenoids. The Journal of Physical Chemistry Letters 15(29), 7466-7472, 2024. https://doi.org/10.1021/acs.jpclett.4c01272

Javed, A, Lüttig, J, Sanders, SE, Sessa, F, Gardiner, AT, Joffre, M, Ogilvie, JP*: Broadband rapid-scanning phase-modulated Fourier transform electronic spectroscopy. Optics Express 32(16), 28035-28047, 2024. https://doi.org/10.1364/OE.530991

Piwosz, K*, Villena-Alemany, C, Całkiewicz, J, Mujakić, I, Náhlík, V, Dean, J, Koblížek, M: Response of aerobic anoxygenic phototrophic bacteria to limitation and availability of organic carbon. FEMS Microbiology Ecology 100(7), fiae090, 2024. https://doi.org/10.1093/femsec/fiae090