Centre Algatech

Institute of Michrobiology, Academy of Sciences of the Czech Republic

Publications

LaboratoryPublicationYear
Laboratory of Photosynthesis
Roman Sobotka`s group

Sobotka, R: Making proteins green; biosynthesis of chlorophyll-binding proteins in cyanobacteria. Photosynthesis Research 119, 223-232, 2014.


2014
Laboratory of Photosynthesis
Roman Sobotka`s group

Sobotka, R., Komenda, J., Bumba, L., Tichý, M. (2005) Photosystem II assembly in CP47 mutant of Synechocystis sp. PCC 6803 is dependent on the level of chlorophyll precursors regulated by ferrochelatase. Journal of Biological Chemistry 280, 31595-31602.


2005
Laboratory of Photosynthesis
Roman Sobotka`s group

Sobotka, R., Dühring, U., Komenda, J., Peter, E., Gardian, Z., Tichý, M., Grimm, B., Wilde, A. (2008) Improtance of the cyanobacterial Gun4 protein for chlorophyll metabolism and assembly of photosynthetic complexes. Journal of Biological Chemistry 283, 25794-25802.


2008
Laboratory of Photosynthesis
Roman Sobotka`s group

Sobotka, R., McLean, S., Žuberová, M., Hunter, C.N., Tichý, M. (2008) The C-Terminal extension of ferrochelatase is critical for enzyme aktivity and for functioning of the tetrapyrrole pathway in Synechocystis strain PCC 6803. Journal of Bacteriology 190, 2086-2095.


2008
Laboratory of Photosynthesis
Roman Sobotka`s group

Dobáková, M., Sobotka, R., Tichý, M., Komenda, J. (2009) Psb28 protein is i volved in the biogenesis of the photosystem II inner antenna CP47 (PsbB) in the cyanobacterium Synechocystis sp. PCC 6803. Plant Physiology 149, 1076-1086.


2009
Laboratory of Photosynthesis
Roman Sobotka`s group

Sobotka, R, Tichý, M, Wilde, A, Hunter, AN: Functional assignments for the carboxyl-terminal domains of the ferrochelatase from Synechocystis PCC 6803: The CAB domain plays a regulatory role, and region II is essential for catalysis1[W]. Plant Physiology 155, 1735-1747, 2011.


2011
Laboratory of Photosynthesis
Roman Sobotka`s group

Wallner, T, Hagiwara, Y, Bernát, G, Sobotka, R, Reijerse, EJ, Frankenberg-Dinkel, N, Wilde, A: Inactivation of the conserved open reading frame ycf34 of Synechocystis sp. PCC6803 interferes dwith the photosynthetic electron transport chain. Biochimica et Biophysica Acta 1817, 2016-2026, 2012.


2012
Laboratory of Photosynthesis
Roman Sobotka`s group

Kopečná, J, Komenda, J, Bučinská, L, Sobotka, R: Long-term acclimation of the cyanobacterium Synechocystis PCC6803 to high light is accompanied by an enhanced production of chlorophyll that is preferentially channeled to trimeric PSI. Plant Physiology 160, 2239-2250, 2012.


2012
Laboratory of Photosynthesis
Roman Sobotka`s group

Kafková, L, Ammerman, ML, Faktorová, D, Fisk, JC, Zimmer, SL, Sobotka, R, Read, LK, Lukeš, J, Hashimi, H: Functional characterization of two paralogs that are novel RNA binding proteins influencing mitochondrial transcripts of Trypanosoma brucei. RNA 18, 1846-1861, 2012.


2012
Laboratory of Photosynthesis
Roman Sobotka`s group

Hollingshead, S, Kopečná, J, Jackson, PJ, Canniffe, DP, Davidson, PA, Dickman, MJ, Sobotka, R, Hunter, CN: Conserved chloroplast open-reading freame ycf54 is required for activity of the magnesium protoporphyrin  monomethylester oxidative cyclase in Synechocystis PCC 6803. Journal of Biological Chemistry 287, 27823-27833, 2012.


2012
Laboratory of Photosynthesis
Radek Kana`s group

Kaňa, R., Prášil, O., Komárek, O., Papageorgiou, G.C., Govindjee: Spectral characteristic of luorescence induction in a model cyanobacterium, Synechococcus sp. (PCC 7942). – Biochimica et Biophysica Acta – Bioenergetics 1787, 1170-1178, 2009.


2009
Laboratory of algal biotechnology
Pavel Hrouzek's group

Křístková, B, Rädisch, R, Kulik, N, Horvat, M, Rucká, L, Grulich, M, Rudroff, F, Kádek, A, Pátek, M, Winkler, M, Martínková, L: Scanning aldoxime dehydratase sequence space and characterization of a new aldoxime dehydratase from Fusarium vanettenii. Enzyme and Microbial Technology, 110187, 2022. https://doi.org/10.1016/j.enzmictec.2022.110187


2022
Laboratory of algal biotechnology
Pavel Hrouzek's group

Bojarová, P*, Kulik, N, Slámová, K, Hubálek, M, Kotik, M, Cvačka, J, Pelantová, H, Křen, V: Selective β-N-acetylhexosaminidase from Aspergillus versicolor-a tool for producing bioactive carbohydrates. Applied microbiology and biotechnology 103(4), 1737–1753, 2019. https://doi.org/10.1007/s00253-018-9534-z


2019
Laboratory of Photosynthesis
Ondřej Prášil`s group

Hála J., Vácha M., Dian J., Ambrož M., Adamec F., Prášil O., Komenda J., Nedbal L., Vácha F., Mareš J.: Structure and function of photosynthetic systems studied by hole burning spectroscopy. - J. Luminescence 48 and 49, 295-298, 1991.


1991
Laboratory of Photosynthesis

Weber, P*, Bojarová, P, Brouzdová, J, Křen, V, Kulik, N, Stütz, AE*, Thonhofer, M, Wrodnigg, TM: Diaminocyclopentane – L-lysine adducts: Potent and selective inhibitors of human O-GlcNAcase. Bioorganic Chemistry, 148. https://doi.org/10.1016/j.bioorg.2024.107452


2024
Laboratory of Photosynthesis

Mészáros, Z, Kulik, N, Petrásková, L, Bojarová, P, Texidó, M, Planas, A, Křen, V, Slámová, K*: Three-step enzymatic remodeling of chitin into bioactive chitooligomers. Journal of Agricultural and Food Chemistry 72(28), 15613-15623, 2024. https://doi.org/10.1021/acs.jafc.4c03077


2024
Laboratory of Photosynthesis

Vrbata, D, Červený, J, Kulik, N, Hovorková, M, Balogová, S, Vlachová, M, Pelantová, H, Křen, V, Bojarová, P*: Glycomimetic inhibitors of tandem-repeat galectins: Simple and efficient. Bioorganic Chemistry 145, 2024. https://doi.org/10.1016/j.bioorg.2024.107231


2024
Laboratory of Photosynthesis

Kotik, M, Kulik, N, Valentová, K. Flavonoids as aglycones in retaining glycosidase-catalyzed reactions: prospects for green chemistry. Journal of Agricultural and Food Chemistry 71(41), 14890-14910, 2023. https://doi.org/10.1021/acs.jafc.3c04389


2023
Laboratory of Photosynthesis

Martínková, L*, Kulik, N, Sedova, A, Křístková, B, Bojarová, P: Recent progress in the production of cyanide-converting nitrilases - comparison with nitrile-hydrolyzing enzymes. Catalysts 13(3), 500, 2023. https://doi.org/10.3390/catal13030500


2023
Laboratory of Photosynthesis

Weber, P*, Mészáros, Z, Bojarová, P, Ebner, M, Fischer, R, Křen, V, Kulik, N, Müller, P, Vlachová, M, Slámová, K, Stütz, AE, Thonhofer, M, Torvisco, A, Wrodnigg, TM, Wolfsgruber, A: Highly functionalized diaminocyclopentanes: A new route to potent and selective inhibitors of human O-GlcNAcase. Bioorganic Chemistry 140, 106819, 2023. https://doi.org/10.1016/j.bioorg.2023.106819


2023
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