Niedzwiedzki, DM, Tronina, T, Liu, H, Staleva, H, Komenda, J, Sobotka, R, Blankenship, RE, Polívka, T: Carotenoid-induced non-photochemical quenching in the cyanobacterial chlorophyll synthase-HliC/D complex. Biochimica et Biophysica Acta-Bioenergetics 1857 (9), 1430-9, 2016.

Tichý, M, Bečková, M, Kopečná, J, Noda, J, Sobotka, R, Komenda, J: Strain of Synechocystis PCC 6803 with aberrant assembly of Photosystem II contains tandem duplication of a large chromosomal region. Frontiers in Plant Science 7, 648, 2016.

Selao, TT,  Zhang, L, Knoppová, J, Komenda, J, Norling, B: Photosystem II Assembly Steps Take Place in the Thylakoid Membrane of the Cyanobacterium Synechocystis sp. PCC6803. Plant Cell Physiol 57(4), 878–878, 2016.

Komenda, J, Sobotka, R: Cyanobacterial high-light-inducible proteins — Protectors of chlorophyll–protein synthesis and assembly.  Biochimica et Biophysica Acta-Bioenergetics 1857(3), 288-95, 2016.

Krynická, V,  Shao, S, Nixon, PJ, Komenda, J: Accessibility controls selective degradation of photosystem II subunits by FtsH protease. Nat Plants 1 (12), 15168, 2015.

Kopečná, J, Pilný, J,  Krynická, V, Tomčala, A, Kis, M, Gombos, Z, Komenda, J, Sobotka, R: Lack of Phosphatidylglycerol Inhibits Chlorophyll Biosynthesis at Multiple Sites and Limits Chlorophyllide Reutilization in Synechocystis sp. Strain PCC 6803. Plant Physiology 169, 1307-1317, 2015.

Tóth, TN, Chukhutsina, V, Domonkos, I, Knoppová, J, Komenda, J, Kis, M, Lénárt, Z, Garab, G, Kovács, L, Gombos, Z, van Amerongen, H: Carotenoids are essential for the assembly of cyanobacterial photosynthetic complexes. Biochimica et Biophysica Acta 1847, 1153–1165, 2015.

D'Haene, SE, Sobotka, R, Bučinská, L, Dekker, JP, Komenda, J: Interaction of the PsbH subunit with a chlorophyll bound to histidine 114 of CP47 is responsible for the red 77 K fluorescence of Photosystem II. Biochimica et Biophysica Acta 1847, 1327–1334, 2015.

Staleva, H, Komenda, J, Shukla, MK, Šlouf, V, Kaňa, R, Polívka, T, Sobotka, R: Mechanism of photoprotection in the cyanobacterial ancestor of plant antenna protein. Nature Chemical Biology 11, 287-291, 2015.

Linhartová, M, Bučinská, L, Halada, P, Ječmen, T, Šetlík, J, Komenda, J, Sobotka, R: Accumulation of the Type IV prepilin triggers degradation of SecY and YidC and inhibits synthesis of Photosystem II proteins in the cyanobacterium Synechocystis PCC 6803. Molecular Microbiology 93, 1207-1223, 2014.

Krynická, V, Tichý, M, Krafl, J, Yu, J, Kaňa, R, Boehm, M, Nixon, PJ, Komenda, J: Two essential FtsH proteases control the level of the Fur repressor in the cyanobacterium Synechocystis sp. PCC 6803 during iron deficiency. Molecular Microbiology 94, 609-624, 2014.

Chidgey, JW, Linhartová, M, Komenda, J, Jackson, PJ, Dickman, MJ, Caniffe, DP, Pilný, J, Hunter, N, Sobotka, R: A Cyanobacterial Chlorophyll Synthase-HliD Complex Associates with the Ycf39 Protein and the YidC/Alb3 Insertase. Plant Cell 26(3), 1267-1279, 2014.

Vass, IZ, Kós, PB, Knoppová, J, Komenda, J, Vass, I: The cry-DASH cryptochrome encoded by the sll1629 gene in the cyanobacterium Synechocystis PCC 6803 is required for Photosystem II repair. Journal of Photochemistry and Photobiology B: Biology 130, 318-326, 2014.

Knoppová, J, Sobotka, R, Tichý, M, Yu, J, Halada, P, Nixon, PJ, Komenda, J: Discovery of a Chlorophyll Binding Protein Complex Involved in the Early Steps of Photosystem II Assembly in Synechocystis. Plant Cell 26, 1200-1212, 2014.

Rengstl, B, Knoppová, J, Komenda, J, Nickelsen, J: Characterization of a Synechocystis double mutant lacking the photosystem II assembly factor YCF48 and Sll0933. Planta 237, 471-480, 2013.

Kopečná, J, Sobotka, R, Komenda, J: Inhibition of chlorophyll biosynthesis at the protochlorophyllide reduction step results in the parallel depletion of Photosystem I and Photosystem II in the cyanobacterium Synechocystis PCC 6803. Planta 237, 497-508, 2013.

Janouškovec, J*, Sobotka, R, Lai, D-H, Flegontov, P, Koník, P, Komenda, J, Ali, S, Prášil, O, Pain, A, Oborník, M, Lukeš, J, Keeling, PJ: Split photosystem protein, linear-mapping topology, and growth of structural complexity in the plastid genome of Chromera velia. Molecular Biology and Evolution 30, 2447–62, 2013. https://doi.org/10.1093/molbev/mst144

Bialek, W, Wen, S, Michoux, F, Bečková, M, Komenda, J, Murray, JW, Nixon, P: Crystal structure of the Psb 28 accessory factor of Thermosynechococcus elongatus photosystem II at 2.3 A. Photosynthesis Research 117, 375-383, 2013.

Komenda, J, Michoux, F, Nixon, PJ: Keeping the green world alive. The repair cycle of Photosystem II. In: Self-healing at the nanoscale: mechanisms and key concepts of natural and artificial systems. CRC Press, 3-22, 2012.

Sinha, RK, Komenda, J, Knoppová, J, Sedlářová, M, Pospíšil, P: Smal CAB-like proteins prevent formation of singlet oxygen in the damaged photosystem II complex of the cyanobacterium Synechocystis sp. PCC 6803. Plant, Cell and Environment 35, 806-818, 2012.